function varargout=sortann(varargin) % % sortann(recName,annName,beginTime,stopTime,outFile) % % Wrapper to WFDB SORTANN: % http://www.physionet.org/physiotools/wag/sortan-1.htm % % Rewrites the annotation file specified by recName and annName, arranging its contents in % canonical (time, num, and chan) order. The sorted (output) annotation file is always written % to the current directory. If the input annotation file is in the current directory, SORTANN % replaces it unless you specify a different output annotator name (using the outFile option). % If the input annotations are already in the correct order, no output is written unless you % have used the outFile option. % % %Input Parameters: % recName % String specifying the WFDB record file. % % annName % String specifying the reference WFDB annotation file. % % stopTime (Optional) % String specifying the start time in WFDB format (default is beginning of % record). % % stopTime (Optional) % String specifying the stop time in WFDB format (default is end of % record). % % outFile (Optional) % String specifying the output annotation file name. % % % Written by Ikaro Silva, 2013 % Last Modified: - % Version 1.0 % Since 0.9.0 % % %Example (this will generate a /mitdb/100.sortedATR file at your directory): % % sortann('mitdb/100','atr',[],[],'sortedATR'); % ann=rdann('mitdb/100','sortedATR'); % % % See also RDANN %endOfHelp persistent javaWfdbExec if(isempty(javaWfdbExec)) javaWfdbExec=getWfdbClass('sortann'); end %Set default pararamter values inputs={'recName','annName','beginTime','stopTime','outFile'}; recName=[]; annName=[]; beginTime=[]; stopTime=[]; outFile=[]; for n=1:nargin if(~isempty(varargin{n})) eval([inputs{n} '=varargin{n};']) end end wfdb_argument={'-r',recName,'-a',annName}; if(~isempty(beginTime)) wfdb_argument{end+1}='-f'; wfdb_argument{end+1}=beginTime; end if(~isempty(stopTime)) wfdb_argument{end+1}='-t'; wfdb_argument{end+1}=stopTime; end if(~isempty(outFile)) wfdb_argument{end+1}='-o'; wfdb_argument{end+1}=outFile; end javaWfdbExec.execToStringList(wfdb_argument);