/* file wrann.c G. Moody 6 July 1983 Last revised: 27 July 2010 ------------------------------------------------------------------------------- wrann: Translate an ASCII file in 'rdann' output format to an annotation file Copyright (C) 1983-2010 George B. Moody This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, see . You may contact the author by e-mail (wfdb@physionet.org) or postal mail (MIT Room E25-505A, Cambridge, MA 02139 USA). For updates to this software, please visit PhysioNet (http://www.physionet.org/). _______________________________________________________________________________ */ #include #ifndef __STDC__ extern void exit(); #endif #include #include char *pname; main(argc, argv) int argc; char *argv[]; { static WFDB_Anninfo ai; WFDB_Annotation annot; static char line[400]; char annstr[10], *p, *record = NULL, *prog_name(); int i, sub, ch, nm; long tm; void help(); pname = prog_name(argv[0]); /* Interpret command-line options. */ for (i = 1; i < argc; i++) { if (*argv[i] == '-') switch (*(argv[i]+1)) { case 'a': /* annotator follows */ if (++i >= argc) { (void)fprintf(stderr, "%s: annotator must follow -a\n", pname); exit(1); } ai.name = argv[i]; break; case 'h': /* print usage summary and quit */ help(); exit(0); break; case 'r': /* input record name follows */ if (++i >= argc) { (void)fprintf(stderr, "%s: input record name must follow -r\n", pname); exit(1); } record = argv[i]; break; default: (void)fprintf(stderr, "%s: unrecognized option %s\n", pname, argv[i]); exit(1); } else { (void)fprintf(stderr, "%s: unrecognized argument %s\n", pname, argv[i]); exit(1); } } if (record == NULL || ai.name == NULL) { help(); exit(1); } setafreq(sampfreq(record)); ai.stat = WFDB_WRITE; if (annopen(record, &ai, 1) < 0) /* open annotation file */ exit(2); while (fgets(line, sizeof(line), stdin) != NULL) { static char a[256], *ap; int auxlen; p = line+9; if (line[0] == '[') while (*p != ']') p++; while (*p != ' ') p++; *(a+1) = '\0'; (void)sscanf(p+1, "%ld%s%d%d%d", &tm, annstr, &sub, &ch, &nm); annot.anntyp = strann(annstr); if (line[0] == '[') { annot.time = -strtim(line); if (annot.time < 0L) continue; } else annot.time = tm; annot.subtyp = sub; annot.chan = ch; annot.num = nm; /* If annstr does not contain a recognizable mnemonic, write a NOTE annotation and put annstr at the beginning of the aux field. */ if (annot.anntyp == NOTQRS) annot.anntyp = NOTE; else *annstr = '\0'; if (ap = strchr(p+1, '\t')) { /* check if auxinfo at end of line */ if (strlen(annstr) + strlen(ap) + 2 > sizeof(a)) ap[sizeof(a)-strlen(annstr)-3] = '\0'; else ap[strlen(ap)-1] = '\0'; /* else discard trailing newline */ } /* Create an aux string if needed. */ if (*annstr || ap) { if (*annstr && ap) sprintf(a+1, "%s %s", annstr, ap+1); else if (*annstr) sprintf(a+1, "%s", annstr); else sprintf(a+1, "%s", ap+1); *a = strlen(a+1); annot.aux = a; } else annot.aux = NULL; (void)putann(0, &annot); } wfdbquit(); exit(0); /*NOTREACHED*/ } char *prog_name(s) char *s; { char *p = s + strlen(s); #ifdef MSDOS while (p >= s && *p != '\\' && *p != ':') { if (*p == '.') *p = '\0'; /* strip off extension */ if ('A' <= *p && *p <= 'Z') *p += 'a' - 'A'; /* convert to lower case */ p--; } #else while (p >= s && *p != '/') p--; #endif return (p+1); } void help() { (void)fprintf(stderr, "usage: %s -r RECORD -a ANNOTATOR