Additional Software for Challenge Sandbox Evaluation

The new PhysioNet website is available at: https://physionet.org. We welcome your feedback.

This directory contains software that is used for evaluating entries in the PhysioNet/Computing in Cardiology Challenge. These packages are designed to be installed on a Debian GNU/Linux system, so that they can be used as part of a Challenge entry. (See Sandbox Evaluation of Entries in PhysioNet/Computing in Cardiology Challenges for more details of this process.) These packages include:

Although these packages may be installed on any Debian system, they are primarily intended for Challenge use, and have not been tested outside of that context. Documentation may be incomplete; features may be missing; configuration may be non-standard. Packages are built only for the amd64 architecture and may not work on other architectures.

Package index

Package Version Description
bazel0.11.1-dist-0+pn1tool that automates software builds and tests
ecgpuwave1.3.3-0~pn1QRS detector and waveform limit locator
islandhack0.1-0+pn1run a program with simulated WWW access
0.4-0+pn1run a program with simulated WWW access
keras-doc2.2.2-0+pn1CPU/GPU math expression compiler for Python (docs)
libislandhack00.4-0+pn1library to provide a fake certificate authority
libopencv-calib3d-dev3.2.0+dfsg-4.1~pn0development files for libopencv-calib3d3.2
libopencv-calib3d3.23.2.0+dfsg-4.1~pn0computer vision Camera Calibration library
libopencv-contrib-dev3.2.0+dfsg-4.1~pn0development files for libopencv-contrib3.2
libopencv-contrib3.23.2.0+dfsg-4.1~pn0computer vision contrlib library
libopencv-core-dev3.2.0+dfsg-4.1~pn0development files for libopencv-core3.2
libopencv-core3.23.2.0+dfsg-4.1~pn0computer vision core library
libopencv-dev3.2.0+dfsg-4.1~pn0development files for opencv
libopencv-features2d-dev3.2.0+dfsg-4.1~pn0development files for libopencv-features2d3.2
libopencv-features2d3.23.2.0+dfsg-4.1~pn0computer vision Feature Detection and Descriptor Extraction library
libopencv-flann-dev3.2.0+dfsg-4.1~pn0development files for libopencv-flann3.2
libopencv-flann3.23.2.0+dfsg-4.1~pn0computer vision Clustering and Search in Multi-Dimensional spaces library
libopencv-highgui-dev3.2.0+dfsg-4.1~pn0development files for libopencv-highgui3.2
libopencv-highgui3.23.2.0+dfsg-4.1~pn0computer vision High-level GUI and Media I/O library
libopencv-imgcodecs-dev3.2.0+dfsg-4.1~pn0development files for libopencv-imgcodecs3.2
libopencv-imgcodecs3.23.2.0+dfsg-4.1~pn0computer vision Image Codecs library
libopencv-imgproc-dev3.2.0+dfsg-4.1~pn0development files for libopencv-imgproc3.2
libopencv-imgproc3.23.2.0+dfsg-4.1~pn0computer vision Image Processing library
libopencv-ml-dev3.2.0+dfsg-4.1~pn0development files for libopencv-ml3.2
libopencv-ml3.23.2.0+dfsg-4.1~pn0computer vision Machine Learning library
libopencv-objdetect-dev3.2.0+dfsg-4.1~pn0development files for libopencv-objdetect3.2
libopencv-objdetect3.23.2.0+dfsg-4.1~pn0computer vision Object Detection library
libopencv-photo-dev3.2.0+dfsg-4.1~pn0development files for libopencv-photo3.2
libopencv-photo3.23.2.0+dfsg-4.1~pn0computer vision computational photography library
libopencv-shape-dev3.2.0+dfsg-4.1~pn0development files for libopencv-shape3.2
libopencv-shape3.23.2.0+dfsg-4.1~pn0computer vision shape descriptors and matchers library
libopencv-stitching-dev3.2.0+dfsg-4.1~pn0development files for libopencv-stitching3.2
libopencv-stitching3.23.2.0+dfsg-4.1~pn0computer vision image stitching library
libopencv-superres-dev3.2.0+dfsg-4.1~pn0development files for libopencv-superres3.2
libopencv-superres3.23.2.0+dfsg-4.1~pn0computer vision Super Resolution library
libopencv-ts-dev3.2.0+dfsg-4.1~pn0development files for TS library of OpenCV (Open Computer Vision)
libopencv-video-dev3.2.0+dfsg-4.1~pn0development files for libopencv-video3.2
libopencv-video3.23.2.0+dfsg-4.1~pn0computer vision Video analysis library
libopencv-videoio-dev3.2.0+dfsg-4.1~pn0development files for libopencv-videoio3.2
libopencv-videoio3.23.2.0+dfsg-4.1~pn0computer vision Video I/O library
libopencv-videostab-dev3.2.0+dfsg-4.1~pn0development files for libopencv-videostab3.2
libopencv-videostab3.23.2.0+dfsg-4.1~pn0computer vision video stabilization library
libopencv-viz-dev3.2.0+dfsg-4.1~pn0development files for libopencv-viz3.2
libopencv-viz3.23.2.0+dfsg-4.1~pn0computer vision 3D data visualization library
libopencv3.2-java3.2.0+dfsg-4.1~pn0Java bindings for the computer vision library
libopencv3.2-jni3.2.0+dfsg-4.1~pn0Java jni library for the computer vision library
libprotobuf-dev3.6.1-1~pn0protocol buffers C++ library (development files)
libprotobuf-java3.6.1-1~pn0Java bindings for protocol buffers
libprotobuf-lite173.6.1-1~pn0protocol buffers C++ library (lite version)
libprotobuf173.6.1-1~pn0protocol buffers C++ library
libprotoc-dev3.6.1-1~pn0protocol buffers compiler library (development files)
libprotoc173.6.1-1~pn0protocol buffers compiler library
libwfdb-dev10.5.25~pre2-0~pn1WFDB developer's toolkit
libwfdb1010.5.25~pre2-0~pn1Waveform Database library
opencv-data3.2.0+dfsg-4.1~pn0development data for opencv
opencv-doc3.2.0+dfsg-4.1~pn0OpenCV documentation and examples
protobuf-compiler3.6.1-1~pn0compiler for protocol buffer definition files
python-absl-py0.2.2-0+pn1Abseil Python Common Libraries (Python 2)
python-astor0.7.1-0+pn1Python AST manipulator
python-backports.weakref1.0-2backports of new features in Python 2 weakref module
python-gast0.2.0-0+pn1Generic abstract syntax tree library (Python 2)
python-grpcio1.8.6-0+pn1Google RPC Library (Python 2)
python-keras2.0.2+git20170403+64d24215-0~pn1deep learning framework running on Theano or TensorFlow (Python 2)
2.2.2-0+pn1deep learning framework running on Theano or TensorFlow (Python 2)
python-nose-parameterized0.6.0-0~pn0decorator for parameterized testing with Nose - Python 2.x
python-numpy1:1.14.5-1~pn1Numerical Python adds a fast array facility to the Python language
python-numpy-dbg1:1.14.5-1~pn1Fast array facility to the Python language (debug extension)
python-numpy-doc1:1.14.5-1~pn1NumPy documentation
python-opencv3.2.0+dfsg-4.1~pn0Python bindings for the computer vision library
python-protobuf3.6.1-1~pn0Python bindings for protocol buffers
python-scipy1.1.0-1~pn0scientific tools for Python
python-scipy-dbg1.1.0-1~pn0scientific tools for Python - debugging symbols
python-tensorflow1.9.0-0+pn1Computation using data flow graphs for machine learning (Python 2)
python-theano0.9.0-0~pn1CPU/GPU math expression compiler for Python
python-xgboost0.6+git20160810-0~pn1scalable, distributed gradient boosting library (Python 2)
python3-absl-py0.2.2-0+pn1Abseil Python Common Libraries (Python 3)
python3-astor0.7.1-0+pn1Python 3 AST manipulator
python3-backports.weakref1.0-2backports of new features in Python 3 weakref module
python3-gast0.2.0-0+pn1Generic abstract syntax tree library (Python 3)
python3-grpcio1.8.6-0+pn1Google RPC Library (Python 3)
python3-keras2.0.2+git20170403+64d24215-0~pn1deep learning framework running on Theano or TensorFlow (Python 3)
2.2.2-0+pn1deep learning framework running on Theano or TensorFlow (Python 3)
python3-nose-parameterized0.6.0-0~pn0Decorator for parameterized testing with Nose - Python 3.x
python3-numpy1:1.14.5-1~pn1Fast array facility to the Python 3 language
python3-numpy-dbg1:1.14.5-1~pn1Fast array facility to the Python 3 language (debug extension)
python3-opencv3.2.0+dfsg-4.1~pn0Python 3 bindings for the computer vision library
python3-protobuf3.6.1-1~pn0Python 3 bindings for protocol buffers
python3-scipy1.1.0-1~pn0scientific tools for Python 3
python3-scipy-dbg1.1.0-1~pn0scientific tools for Python 3 - debugging symbols
python3-tensorflow1.9.0-0+pn1Computation using data flow graphs for machine learning (Python 3)
python3-theano0.9.0-0~pn1CPU/GPU math expression compiler for Python 3
python3-xgboost0.6+git20160810-0~pn1scalable, distributed gradient boosting library (Python 3)
ruby-google-protobuf3.6.1-1~pn0Protocol Buffers
wfdb10.5.25~pre2-0~pn1Waveform Database Software Package
wfdb-app-toolbox0.9.9+src-0~pn1WFDB Toolbox for MATLAB and Octave
Icon  Name                    Last modified      Size  Description
[PARENTDIR] Parent Directory - [DIR] dists/ 2019-02-28 14:59 - [DIR] pool/ 2018-04-02 16:20 -

Questions and Comments

If you would like help understanding, using, or downloading content, please see our Frequently Asked Questions.

If you have any comments, feedback, or particular questions regarding this page, please send them to the webmaster.

Comments and issues can also be raised on PhysioNet's GitHub page.

Updated Friday, 28 October 2016 at 16:58 EDT

PhysioNet is supported by the National Institute of General Medical Sciences (NIGMS) and the National Institute of Biomedical Imaging and Bioengineering (NIBIB) under NIH grant number 2R01GM104987-09.