Contents

• 1. Introduction
  • 1.1 Overview
  • 1.2 Background
  • 1.3 Overview of data collection
  • 1.4 Data Organization
    • 1.4.1 Types of data
    • 1.4.2 What is a patient record?
    • 1.4.3 Subject ID - Case ID matching
    • 1.4.4 De-identification of patients' data
  • 1.5 Clinical overview of patients in the initial release of the MIMIC II database
  • 1.6 Noise, artifacts and missing data
  • 1.7 Summary and further reading
  
  
• 2. Database Description
  • 2.1 Overview
  • 2.2 Clinical database
    • 2.2.1 Patient
    • 2.2.2 Care Giver
    • 2.2.3 Care Unit
    • 2.2.4 Patient timeline
    • 2.2.5 Patient data
    • 2.2.6 Summary
  • 2.3 High resolution waveforms and associated trends
    • 2.3.1 Overview
    • 2.3.2 The WFDB software package
    • 2.3.3 MIMIC II waveform records
    • 2.3.4 Alarms and Inops
    • 2.3.5 Signal Quality
  
  
• 3. Database Access
  • 3.1 Introduction
  
  
• 4. Examples of data analysis
  • 4.1 Introduction
  • 4.2 Clinical Examples
    • 4.2.1 Patient population age statistics
    • 4.2.2 Resolving discrepancies between multiple itemIDs for one parameter
  
  
• 5. Quick-Start, Frequently Asked Questions and Known problems/issues
  • 5.1 Quick Start
  • 5.2 FAQs about the MIMIC II database
  • 5.3 FAQs about data access
  • 5.4 Known issues/problems
  • 5.5 Abbreviations
  
  
• 6. Appendix
  • 6.1 Database Schema
    • 6.1.1 ADDITIVES
    • 6.1.2 ADMISSIONS
    • 6.1.3 A_CHARTDURATIONS
    • 6.1.4 A_IODURATIONS
    • 6.1.5 A_MEDDURATIONS
    • 6.1.6 CENSUSEVENTS
    • 6.1.7 CHARTEVENTS
    • 6.1.8 DB_SCHEMA
    • 6.1.9 DELIVERIES
    • 6.1.10 D_CAREGIVERS
    • 6.1.11 D_CAREUNITS
    • 6.1.12 D_CHARTITEMS
    • 6.1.13 D_IOITEMS
    • 6.1.14 D_LABITEMS
    • 6.1.15 D_MEDITEMS
    • 6.1.16 D_PARAMMAP_ITEMS
    • 6.1.17 D_PATIENTS
    • 6.1.18 ICD9
    • 6.1.19 IOEVENTS
    • 6.1.20 LABEVENTS
    • 6.1.21 MEDEVENTS
    • 6.1.22 PARAMETER_MAPPING
    • 6.1.23 POE_MED
    • 6.1.24 POE_ORDER
    • 6.1.25 TOTALBALEVENTS
    • 6.1.26 Tables
  • 6.2 Multiple ID mappings
    • 6.2.1 Bicarbonate (HCO3)
    • 6.2.2 Bilirubin (highest)
    • 6.2.3 Blood Pressure
    • 6.2.4 Blood Transfusions
    • 6.2.5 Cardiac Output (CO)
    • 6.2.6 Carbon Dioxide (CO2)
    • 6.2.7 Creatinine (highest)
    • 6.2.8 Central Venous Pressure (CVP)
    • 6.2.9 Glucose Levels
    • 6.2.10 Intra-aortic balloon (IABP) pump rate
    • 6.2.11 Intra-cranial Pressure (ICP)
    • 6.2.12 IV Fluids
    • 6.2.13 Lactate
    • 6.2.14 Oxygen Saturation (SpO2/SaO2)
    • 6.2.15 pH
    • 6.2.16 Potassium
    • 6.2.17 Pressor Medications
    • 6.2.18 Pulmonary Arterial Pressure (PAP)
    • 6.2.19 Respiration Rate
    • 6.2.20 Sodium
    • 6.2.21 Temperature
    • 6.2.22 Urine Output
    • 6.2.23 Ventilators
    • 6.2.24 White Blood Cell Count (WBC)
  • 6.3 Commonly used parameters
  • 6.4 Frequency of all ICD-9 codes for adult ICU-related hospital admissions
  
  
• Bibliography