The new PhysioNet website is available at https://physionet.org.
MIMIC II: Clinical Database Flat Files version 2.5 (Coming Soon!)
MIMIC II Clinical Database version 2.5 flat files contain data for 26,655 subjects, who have been divided (arbitrarily) into five groups of about 5000 subjects each, and a sixth group of about 1700 subjects.Downloads (requires decryption key to use):
- DEFINITIONS (513 KB compressed/ 2.7 MB uncompressed)
- BATCH 1 (subjects 00001-05016, 367 MB compressed/ 3.6 GB uncompressed)
- BATCH 2 (subjects 05017-10026, 366 MB compressed/ 3.6 GB uncompressed)
- BATCH 3 (subjects 10027-15037, 359 MB compressed/ 3.6 GB uncompressed)
- BATCH 4 (subjects 15038-20051, 365 MB compressed/ 3.7 GB uncompressed)
- BATCH 5 (subjects 20052-25070, 346 MB compressed/ 3.4 GB uncompressed)
- BATCH 6 (subjects 25071-26728, 127 MB compressed/ 1.3 GB uncompressed)
DELIMITER: Within each table, fields (columns) are separated by comma and text data is wrapped in double quotes (CSV file format).
Definition tables and maps
The definition tables consist of nine tables containing definitions needed to interpret elements of the subject-specific tables. These tables can be extracted from the Definitions.tar.gz file above. These are:
- D_CAREGIVERS
- D_CAREUNITS
- D_CHARTITEMS
- D_CARTITEMS_DETAIL
- D_IOITEMS
- D_LABITEMS
- D_MEDITEMS
- D_PARAMMAP_ITEMS
- PARAMETER_MAPPING
BATCH Subject data tables
The six BATCH*.tar.gz.pgp files above contain subject-specific tables. An empty file indicates that data of the corresponding type are not available for the given subject. The tarballs unpack into directories for each subject. Each subject's directory contains 20 tables. These tables are:
- A_CHARTDURATIONS
- ADDITIVES
- ADMISSIONS
- A_IODURATIONS
- A_MEDDURATIONS
- CENSUSEVENTS
- CHARTEVENTS
- DELIVERIES
- D_PATIENTS
- ICD9
- ICUSTAY_DAYS
- ICUSTAY_DETAIL
- ICUSTAYEVENTS
- IOEVENTS
- LABEVENTS
- MEDEVENTS
- NOTEEVENTS
- POE_MED
- POE_ORDER
- TOTALBALEVENTS